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Home > Biosecurity Briefing > Archive > Avian/Pandemic Influenza > Avian-Pandemic Flu 2008 BB Archive > Flu Season Marked by Vaccine Mismatch, Antiviral Resistance in Europe (02-15-2008)
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Flu Season Marked by Vaccine Mismatch, Antiviral Resistance in Europe

By Eric Toner, February 15, 2008

According to a recent report from the U.S. Centers for Disease Control and Prevention (CDC), this year’s seasonal influenza epidemic is more severe than those of the last two years. The CDC also reports that there is a mismatch between this year’s vaccine and two of the predominant circulating strains of flu virus;1 at the same time, European health authorities are reporting an unexpected, and so far unexplained, emergence of H1N1 virus with a mutation associated with decreased sensitivity to oseltamivir.2,3

CDC data from the week ending February 2 indicate that 48 of 51 jurisdictions (all 50 states plus the District of Columbia) are reporting regional or widespread flu outbreaks. A sudden jump in mortality attributed to pneumonia and flu, along with increased physician visits for influenza-like illness during the two weeks prior (January 20-February 2), indicate that this season is more severe than the previous two.1

The CDC also reports that, as was the case last year, antigenic typing of flu isolates shows that A/H1N1 is the predominant strain nationally (see Table 1, below). However, both influenza A/H3N2 and influenza B are increasing in frequency and are now predominant in some regions. In the Mid-Atlantic region, half of the isolates have been influenza B during the last 4 weeks, while in the North Central region, H3N2 has been the most frequent isolate. To date, 87% of this year’s H3N2 isolates are the Brisbane strain, which was not included in this year’s vaccine, and 93% of the influenza B virus isolates belong to the Yamagata lineage, also not included in this year’s vaccine.1 Consequently, this year’s vaccine currently does not match 43% of flu isolates in this country.

Table 1: Frequency of influenza isolates by strain

Strain

# of isolates/
out of 197

Included
in vaccine?

A/H1N1 

101 (51%) 

 
     A/ Solomon Island (H1N1)

97 (49%)

 yes

A/H3N2

53 (27%) 

 
     A/Wisconsin (H3N2)

6 (3%)

yes

     A/Brisbane (H3N2)

46 (23%)

no

B

43 (22%) 

 
     B/Victoria 

3 (1%) 

 yes

     B/Yamagata 

 40 (20%)

no



The degree of cross-protection afforded by this year’s vaccine against these strains is uncertain. Scientific evidence suggests that some degree of cross-protection is possible due to the fact that H3N2/Brisbane is a recent variant that evolved from H3N2/Wisconsin, a strain that is included in the current vaccine.4 However, it is thought that there is less likely to be cross-protection between the B/Yamagata strain and the B/Victoria vaccine strain.5

On a related note, reports from Europe indicate that 20% (151/755) of this year’s H1N1 isolates contain a genetic mutation that has been associated with decreased sensitivity to the antiviral drug oseltamivir.2,3 In Europe, 80% of the isolates are influenza A, and 98% of those are H1N1. Oseltamivir is not commonly used in Europe to treat seasonal influenza.4

The World Health Organization (WHO) reports that evidence of oseltamivir resistance has been found in H1N1 viruses isolated from 18 of 37 countries.6 In Norway and in France, 63% and 39% of H1N1 viruses isolated, respectively, have shown genetic mutations associated with oseltamivir resistance. None of the patients in Norway from whom resistant viruses were isolated had been treated, or had known contact with anyone who had been treated, with oseltamivir.7 In contrast, the CDC reported that 8% of H1N1 isolates from the United States have the mutation that has been associated with oseltamivir resistance (4.5 % of all influenza viruses tested).

As reported on February 14, 2008 by CIDRAP News, in light of new surveillance data, WHO announced that all three components of next year’s flu vaccine for the northern hemisphere should be changed. In addition to CDC’s announcement regarding the mismatch between the influenza A/H3N2 and influenza B components of this year's vaccine, WHO reports “that the majority of recent H1N1 virus isolates globally have not matched well with the H1N1 component of the vaccine.” Although it is not unusual for one or two components of the vaccine to be changed, “replacing all three is less common.”6

References

  1. Centers for Disease Control and Prevention. FluView weekly influenza surveillance report: 2007-2008 influenza season week 5, ending February 2, 2008. http://www.cdc.gov/flu/weekly/index.htm. Accessed February 13,2008.
  2. European Influenza Surveillance Scheme. Medium levels of influenza activity in most European countries. Weekly Electronic Bulletin. Issue Number 252. February 8, 2008. http://www.eiss.org/cgi-files/bulletin_v2.cgi?display=1&code=252&bulletin=252. Accessed February 13, 2008.
  3. European Centre for Disease Prevention and Control. Oseltamivir resistance in human seasonal influenza Type A/H1N1 isolates in Europe. http://ecdc.europa.eu/Health_topics/influenza/antivirals_table.html. Accessed February 13, 2008.
  4. Toner E. This year’s flu season marked by vaccine mismatch in the U.S. and antiviral resistance in Europe. Clinicians’ Biosecurity Network. February 14, 2007. http://www.upmc-cbn.org/index.html. Accessed February 15, 2008.
  5. Schnirring L. CDC says influenza B strain doesn't match vaccine. Center for Infectious Disease Research and Policy (CIDRAP). February 8, 2008. http://www.cidrap.umn.edu/
    cidrap/content/influenza/ general/news/feb0808flu.html
    . Accessed February 13, 2008.
  6. Roos R. WHO advises total makeover for 2008-09 flu vaccine. February 14, 2008. CIDRAP News. http://www.cidrap.umn.edu/cidrap/content/influenza/general/news/
    feb1408vaccine-jw.html
    . Accessed February 15, 2008.
  7. Zambon M, Hay A, Paget J. Antiviral drug resistance of influenza viruses in Europe–winter 2007-2008. European Influenza Surveillance Scheme. http://www.eiss.org/documents/
    Antiviral_drug_resistance_in_ Europe_-_Winter_2007-2008.pdf
    . Accessed February 13, 2008.